Detection of Influenza A Virus in Pigs in Lagos, Nigeria

Abstract

This study detected and subtyped strains of influenza virus from pigs in Lagos, South-western Nigeria. A total of 116 (58 nasal and 58 throat) samples from healthy pigs were analysed from two different sites in Ayedoto farm at Ojo Local Government between June and September, 2010 using reverse transcription polymerase chain reaction (RT-PCR). Influenza virus type A 31(26.7%) was detected. Subtyping was done using RT-PCR with H1, H3 and H5 primers and only subtypes H1 [5(16.1%)] and H5 [5(16.1%)] were detected. No positive detection was made for subtype H3. This research work is the first documented detection of influenza A virus in pigs in Lagos, Nigeria and demonstrates the need for a sustainable surveillance mechanism of swine and other influenza viruses to be able to prevent influenza epidemic in the environment.

Keywords: Subtype, Influenza A, Pig, Lagos