Analysis of diversity genetic of Moroccan net blotch populations using amplified fragment length polymorphism (AFLP) markers

Abstract

Net blotch caused by Pyrenophora teres f. teres is the most harmful foliar disease in barley generating significant economic losses in Morocco. Populations of P. teres f. teres were collected from different regions of Morocco. Thirty five (35) P. teres f. teres isolates, single conidial, were isolated and were subjected to molecular study using amplified fragment length polymorphism (AFLP) technique. Out of the fourteen primers combinations tested, four primers combinations were selected to disclose the polymorphism between the different P. teres f. teres isolates. The molecular characterization of these isolates showed high degree of polymorphism reaching 95% and identifying 25 specific genotypes. The genetic variability of the different isolates of P. teres f. teres within and between Moroccan regions was highlighted, disclosing no linkage between the isolates and their geographical origins. This result might be due to informal material flow between regions.

Key words: Barley, net blotch, Pyrenophora teres f. teres, amplified fragment length polymorphism (AFLP), genetic diversity.